| basecode/Cinfo.cpp | |
| basecode/Cinfo.h [code] | |
| basecode/consts.cpp | |
| basecode/Conv.h [code] | |
| basecode/DataElement.cpp | |
| basecode/DataElement.h [code] | |
| basecode/DestFinfo.cpp | |
| basecode/DestFinfo.h [code] | |
| basecode/Dinfo.h [code] | |
| basecode/doubleEq.cpp | |
| basecode/doubleEq.h [code] | |
| basecode/Element.cpp | |
| basecode/Element.h [code] | |
| basecode/ElementValueFinfo.h [code] | |
| basecode/EpFunc.cpp | |
| basecode/EpFunc.h [code] | |
| basecode/Eref.cpp | |
| basecode/Eref.h [code] | |
| basecode/FieldElement.cpp | |
| basecode/FieldElement.h [code] | |
| basecode/FieldElementFinfo.cpp | |
| basecode/FieldElementFinfo.h [code] | |
| basecode/Finfo.cpp | |
| basecode/Finfo.h [code] | |
| basecode/FuncOrder.h [code] | |
| basecode/global.cpp | |
| basecode/global.h [code] | |
| basecode/GlobalDataElement.cpp | |
| basecode/GlobalDataElement.h [code] | |
| basecode/header.h [code] | |
| basecode/HopFunc.cpp | |
| basecode/HopFunc.h [code] | |
| basecode/Id.cpp | |
| basecode/Id.h [code] | |
| basecode/LocalDataElement.cpp | |
| basecode/LocalDataElement.h [code] | |
| basecode/LookupElementValueFinfo.h [code] | |
| basecode/LookupValueFinfo.h [code] | |
| basecode/main.cpp | |
| basecode/MsgDigest.h [code] | |
| basecode/MsgElement.h [code] | |
| basecode/MsgFuncBinding.h [code] | |
| basecode/ObjId.cpp | |
| basecode/ObjId.h [code] | |
| basecode/OpFunc.h [code] | |
| basecode/OpFuncBase.cpp | |
| basecode/OpFuncBase.h [code] | |
| basecode/PrepackedBuffer.cpp | |
| basecode/PrepackedBuffer.h [code] | |
| basecode/ProcInfo.h [code] | |
| basecode/ProcOpFunc.h [code] | |
| basecode/SetGet.cpp | |
| basecode/SetGet.h [code] | |
| basecode/SharedFinfo.cpp | |
| basecode/SharedFinfo.h [code] | |
| basecode/SparseMatrix.cpp | |
| basecode/SparseMatrix.h [code] | |
| basecode/SrcFinfo.cpp | |
| basecode/SrcFinfo.h [code] | |
| basecode/testAsync.cpp | |
| basecode/ValueFinfo.cpp | |
| basecode/ValueFinfo.h [code] | |
| biophysics/CaConc.cpp | |
| biophysics/CaConc.h [code] | |
| biophysics/CaConcBase.cpp | |
| biophysics/CaConcBase.h [code] | |
| biophysics/ChanBase.cpp | |
| biophysics/ChanBase.h [code] | |
| biophysics/ChanCommon.cpp | |
| biophysics/ChanCommon.h [code] | |
| biophysics/Compartment.cpp | |
| biophysics/Compartment.h [code] | |
| biophysics/CompartmentBase.cpp | |
| biophysics/CompartmentBase.h [code] | |
| biophysics/CompartmentDataHolder.cpp | |
| biophysics/CompartmentDataHolder.h [code] | |
| biophysics/DifShell.cpp | |
| biophysics/DifShell.h [code] | |
| biophysics/GapJunction.cpp | |
| biophysics/GapJunction.h [code] | |
| biophysics/HHChannel.cpp | |
| biophysics/HHChannel.h [code] | |
| biophysics/HHChannel2D.cpp | |
| biophysics/HHChannel2D.h [code] | |
| biophysics/HHChannelBase.cpp | |
| biophysics/HHChannelBase.h [code] | |
| biophysics/HHGate.cpp | |
| biophysics/HHGate.h [code] | |
| biophysics/HHGate2D.cpp | |
| biophysics/HHGate2D.h [code] | |
| biophysics/IntFire.cpp | |
| biophysics/IntFire.h [code] | |
| biophysics/IzhikevichNrn.cpp | |
| biophysics/IzhikevichNrn.h [code] | |
| biophysics/Leakage.cpp | |
| biophysics/Leakage.h [code] | |
| biophysics/MarkovChannel.cpp | |
| biophysics/MarkovChannel.h [code] | |
| biophysics/MarkovGslSolver.cpp | |
| biophysics/MarkovGslSolver.h [code] | |
| biophysics/MarkovRateTable.cpp | |
| biophysics/MarkovRateTable.h [code] | |
| biophysics/MarkovSolver.cpp | |
| biophysics/MarkovSolver.h [code] | |
| biophysics/MarkovSolverBase.cpp | |
| biophysics/MarkovSolverBase.h [code] | |
| biophysics/MatrixOps.cpp | |
| biophysics/MatrixOps.h [code] | |
| biophysics/MgBlock.cpp | |
| biophysics/MgBlock.h [code] | |
| biophysics/Nernst.cpp | |
| biophysics/Nernst.h [code] | |
| biophysics/Neuron.cpp | |
| biophysics/Neuron.h [code] | |
| biophysics/NMDAChan.cpp | |
| biophysics/NMDAChan.h [code] | |
| biophysics/RandSpike.cpp | |
| biophysics/RandSpike.h [code] | |
| biophysics/ReadCell.cpp | |
| biophysics/ReadCell.h [code] | |
| biophysics/ReadSwc.cpp | |
| biophysics/ReadSwc.h [code] | |
| biophysics/SpikeGen.cpp | |
| biophysics/SpikeGen.h [code] | |
| biophysics/SpikeRingBuffer.cpp | |
| biophysics/SpikeRingBuffer.h [code] | |
| biophysics/Spine.cpp | |
| biophysics/Spine.h [code] | |
| biophysics/SwcSegment.cpp | |
| biophysics/SwcSegment.h [code] | |
| biophysics/SymCompartment.cpp | |
| biophysics/SymCompartment.h [code] | |
| biophysics/SynChan.cpp | |
| biophysics/SynChan.h [code] | |
| biophysics/testBiophysics.cpp | |
| biophysics/VClamp.cpp | |
| biophysics/VClamp.h [code] | |
| biophysics/VectorTable.cpp | |
| biophysics/VectorTable.h [code] | |
| builtins/Arith.cpp | |
| builtins/Arith.h [code] | |
| builtins/Func.cpp | |
| builtins/Func.h [code] | |
| builtins/Function.cpp | |
| builtins/Function.h [code] | |
| builtins/Group.cpp | |
| builtins/Group.h [code] | |
| builtins/HDF5DataWriter.cpp | |
| builtins/HDF5DataWriter.h [code] | |
| builtins/HDF5WriterBase.cpp | |
| builtins/HDF5WriterBase.h [code] | |
| builtins/InputVariable.cpp | |
| builtins/InputVariable.h [code] | |
| builtins/Interpol.cpp | |
| builtins/Interpol.h [code] | |
| builtins/Interpol2D.cpp | |
| builtins/Interpol2D.h [code] | |
| builtins/Mstring.cpp | |
| builtins/Mstring.h [code] | |
| builtins/NSDFWriter.cpp | |
| builtins/NSDFWriter.h [code] | |
| builtins/SpikeStats.cpp | |
| builtins/SpikeStats.h [code] | |
| builtins/Stats.cpp | |
| builtins/Stats.h [code] | |
| builtins/StimulusTable.cpp | |
| builtins/StimulusTable.h [code] | |
| builtins/Table.cpp | |
| builtins/Table.h [code] | |
| builtins/TableBase.cpp | |
| builtins/TableBase.h [code] | |
| builtins/testBuiltins.cpp | |
| builtins/TimeTable.cpp | |
| builtins/TimeTable.h [code] | |
| builtins/Variable.cpp | |
| builtins/Variable.h [code] | |
| device/DiffAmp.cpp | |
| device/DiffAmp.h [code] | |
| device/PIDController.cpp | |
| device/PIDController.h [code] | |
| device/PulseGen.cpp | |
| device/PulseGen.h [code] | |
| device/RC.cpp | |
| device/RC.h [code] | |
| Docs/developer/doxygen-API.cpp | |
| Docs/developer/doxygen-design-document.cpp | |
| Docs/developer/doxygen-main.cpp | |
| Docs/developer/doxygen-programmers-guide.cpp | |
| Docs/developer/hsolve-developer-overview.cpp | |
| Docs/developer/hsolve-implementation.cpp | |
| Docs/developer/parameter_fitting.cpp | |
| Docs/developer/profiling.cpp | |
| Docs/developer/the-messaging-system.cpp | |
| hsolve/Cell.cpp | |
| hsolve/Cell.h [code] | |
| hsolve/HinesMatrix.cpp | |
| hsolve/HinesMatrix.h [code] | |
| hsolve/HSolve.cpp | |
| hsolve/HSolve.h [code] | |
| hsolve/HSolveActive.cpp | |
| hsolve/HSolveActive.h [code] | |
| hsolve/HSolveActiveSetup.cpp | |
| hsolve/HSolveInterface.cpp | |
| hsolve/HSolvePassive.cpp | |
| hsolve/HSolvePassive.h [code] | |
| hsolve/HSolveStruct.cpp | |
| hsolve/HSolveStruct.h [code] | |
| hsolve/HSolveUtils.cpp | |
| hsolve/HSolveUtils.h [code] | |
| hsolve/RateLookup.cpp | |
| hsolve/RateLookup.h [code] | |
| hsolve/testHSolve.cpp | |
| hsolve/TestHSolve.h [code] | |
| hsolve/ZombieCaConc.cpp | |
| hsolve/ZombieCaConc.h [code] | |
| hsolve/ZombieCompartment.cpp | |
| hsolve/ZombieCompartment.h [code] | |
| hsolve/ZombieHHChannel.cpp | |
| hsolve/ZombieHHChannel.h [code] | |
| kinetics/BufPool.cpp | |
| kinetics/BufPool.h [code] | |
| kinetics/CplxEnzBase.cpp | |
| kinetics/CplxEnzBase.h [code] | |
| kinetics/Enz.cpp | |
| kinetics/Enz.h [code] | |
| kinetics/EnzBase.cpp | |
| kinetics/EnzBase.h [code] | |
| kinetics/lookupVolumeFromMesh.cpp | |
| kinetics/lookupVolumeFromMesh.h [code] | |
| kinetics/MMenz.cpp | |
| kinetics/MMenz.h [code] | |
| kinetics/Pool.cpp | |
| kinetics/Pool.h [code] | |
| kinetics/PoolBase.cpp | |
| kinetics/PoolBase.h [code] | |
| kinetics/Reac.cpp | |
| kinetics/Reac.h [code] | |
| kinetics/ReacBase.cpp | |
| kinetics/ReacBase.h [code] | |
| kinetics/ReadCspace.cpp | |
| kinetics/ReadCspace.h [code] | |
| kinetics/ReadKkit.cpp | |
| kinetics/ReadKkit.h [code] | |
| kinetics/Species.cpp | |
| kinetics/Species.h [code] | |
| kinetics/testKinetics.cpp | |
| kinetics/WriteKkit.cpp | |
| ksolve/FuncRateTerm.h [code] | |
| ksolve/FuncTerm.cpp | |
| ksolve/FuncTerm.h [code] | |
| ksolve/Gsolve.cpp | |
| ksolve/Gsolve.h [code] | |
| ksolve/GssaSystem.h [code] | |
| ksolve/GssaVoxelPools.cpp | |
| ksolve/GssaVoxelPools.h [code] | |
| ksolve/KinSparseMatrix.cpp | |
| ksolve/KinSparseMatrix.h [code] | |
| ksolve/Ksolve.cpp | |
| ksolve/Ksolve.h [code] | |
| ksolve/OdeSystem.h [code] | |
| ksolve/RateTerm.cpp | |
| ksolve/RateTerm.h [code] | |
| ksolve/SteadyState.cpp | |
| ksolve/SteadyState.h [code] | |
| ksolve/Stoich.cpp | |
| ksolve/Stoich.h [code] | |
| ksolve/testKsolve.cpp | |
| ksolve/VoxelPools.cpp | |
| ksolve/VoxelPools.h [code] | |
| ksolve/VoxelPoolsBase.cpp | |
| ksolve/VoxelPoolsBase.h [code] | |
| ksolve/XferInfo.h [code] | |
| ksolve/ZombieBufPool.cpp | |
| ksolve/ZombieBufPool.h [code] | |
| ksolve/ZombieEnz.cpp | |
| ksolve/ZombieEnz.h [code] | |
| ksolve/ZombieFunction.cpp | |
| ksolve/ZombieFunction.h [code] | |
| ksolve/ZombieMMenz.cpp | |
| ksolve/ZombieMMenz.h [code] | |
| ksolve/ZombiePool.cpp | |
| ksolve/ZombiePool.h [code] | |
| ksolve/ZombiePoolInterface.cpp | |
| ksolve/ZombiePoolInterface.h [code] | |
| ksolve/ZombieReac.cpp | |
| ksolve/ZombieReac.h [code] | |
| mesh/Boundary.cpp | |
| mesh/Boundary.h [code] | |
| mesh/ChemCompt.cpp | |
| mesh/ChemCompt.h [code] | |
| mesh/CubeMesh.cpp | |
| mesh/CubeMesh.h [code] | |
| mesh/CylBase.cpp | |
| mesh/CylBase.h [code] | |
| mesh/CylMesh.cpp | |
| mesh/CylMesh.h [code] | |
| mesh/MeshCompt.cpp | |
| mesh/MeshCompt.h [code] | |
| mesh/MeshEntry.cpp | |
| mesh/MeshEntry.h [code] | |
| mesh/NeuroMesh.cpp | |
| mesh/NeuroMesh.h [code] | |
| mesh/NeuroNode.cpp | |
| mesh/NeuroNode.h [code] | |
| mesh/PsdMesh.cpp | |
| mesh/PsdMesh.h [code] | |
| mesh/SpineEntry.cpp | |
| mesh/SpineEntry.h [code] | |
| mesh/SpineMesh.cpp | |
| mesh/SpineMesh.h [code] | |
| mesh/Stencil.cpp | |
| mesh/Stencil.h [code] | |
| mesh/testMesh.cpp | |
| mesh/VoxelJunction.h [code] | |
| msg/DiagonalMsg.cpp | |
| msg/DiagonalMsg.h [code] | |
| msg/Msg.cpp | |
| msg/Msg.h [code] | |
| msg/OneToAllMsg.cpp | |
| msg/OneToAllMsg.h [code] | |
| msg/OneToOneDataIndexMsg.cpp | |
| msg/OneToOneDataIndexMsg.h [code] | |
| msg/OneToOneMsg.cpp | |
| msg/OneToOneMsg.h [code] | |
| msg/SingleMsg.cpp | |
| msg/SingleMsg.h [code] | |
| msg/SparseMsg.cpp | |
| msg/SparseMsg.h [code] | |
| msg/testMsg.cpp | |
| randnum/Binomial.cpp | |
| randnum/Binomial.h [code] | |
| randnum/BinomialRng.cpp | |
| randnum/BinomialRng.h [code] | |
| randnum/Exponential.cpp | |
| randnum/Exponential.h [code] | |
| randnum/ExponentialRng.cpp | |
| randnum/ExponentialRng.h [code] | |
| randnum/Gamma.cpp | |
| randnum/Gamma.h [code] | |
| randnum/GammaRng.cpp | |
| randnum/GammaRng.h [code] | |
| randnum/mt19937ar.cpp | |
| randnum/Normal.cpp | |
| randnum/Normal.h [code] | |
| randnum/NormalRng.cpp | |
| randnum/NormalRng.h [code] | |
| randnum/Poisson.cpp | |
| randnum/Poisson.h [code] | |
| randnum/PoissonRng.cpp | |
| randnum/PoissonRng.h [code] | |
| randnum/Probability.cpp | |
| randnum/Probability.h [code] | |
| randnum/RandGenerator.cpp | |
| randnum/RandGenerator.h [code] | |
| randnum/randnum.h [code] | |
| randnum/Uniform.cpp | |
| randnum/Uniform.h [code] | |
| randnum/UniformRng.cpp | |
| randnum/UniformRng.h [code] | |
| sbml/SbmlReader.cpp | |
| sbml/SbmlReader.h [code] | |
| sbml/SbmlWriter.cpp | |
| sbml/SbmlWriter.h [code] | |
| scheduling/Clock.cpp | |
| scheduling/Clock.h [code] | |
| scheduling/testScheduling.cpp | |
| scheduling/testScheduling.h [code] | |
| shell/LoadModels.cpp | |
| shell/LoadModels.h [code] | |
| shell/Neutral.cpp | |
| shell/Neutral.h [code] | |
| shell/SaveModels.cpp | |
| shell/Shell.cpp | |
| shell/Shell.h [code] | |
| shell/ShellCopy.cpp | |
| shell/ShellThreads.cpp | |
| shell/testShell.cpp | |
| shell/Wildcard.cpp | |
| shell/Wildcard.h [code] | |
| signeur/Adaptor.cpp | |
| signeur/Adaptor.h [code] | |
| signeur/testSigNeur.cpp | |
| utility/Annotator.cpp | |
| utility/Annotator.h [code] | |
| utility/numutil.cpp | |
| utility/numutil.h [code] | |
| utility/setupenv.cpp | |
| utility/strutil.cpp | |
| utility/strutil.h [code] | |
| utility/types.cpp | |
| utility/utility.h [code] | |
| utility/Vec.cpp | |
| utility/Vec.h [code] | |
