MOOSE: kinetics/lookupVolumeFromMesh.h Source File

00001 /**********************************************************************
00002 ** This program is part of 'MOOSE', the
00003 ** Messaging Object Oriented Simulation Environment.
00004 **           Copyright (C) 2011 Upinder S. Bhalla. and NCBS
00005 ** It is made available under the terms of the
00006 ** GNU Lesser General Public License version 2.1
00007 ** See the file COPYING.LIB for the full notice.
00008 **********************************************************************/
00009 #ifndef _LOOKUP_SIZE_FROM_MESH_H
00010 #define _LOOKUP_SIZE_FROM_MESH_H
00011 
00012 
00016 extern const double CONC_UNIT_CONV;
00017 
00022 double lookupVolumeFromMesh( const Eref& e );
00023 
00029 unsigned int getReactantVols( const Eref& reac, const SrcFinfo* pools, 
00030     vector< double >& vols );
00031 
00049 double convertConcToNumRateUsingMesh( const Eref& e, const SrcFinfo* pools, 
00050     bool doPartialConversion );
00051 
00064 double convertConcToNumRateUsingVol( const Eref& e, const SrcFinfo* pools, 
00065     double volume, double scale, bool doPartialConversion );
00066 
00080 double convertConcToNumRateInTwoCompts( double v1, unsigned int n1, 
00081     double v2, unsigned int n2, double scale );
00082 
00087 ObjId getCompt( Id id );
00088 
00089 #endif  // _LOOKUP_SIZE_FROM_MESH_H