NeuroStencil Class Reference

#include <NeuroStencil.h>

Inheritance diagram for NeuroStencil:

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Collaboration diagram for NeuroStencil:

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List of all members.

Public Member Functions
	NeuroStencil (const vector< NeuroNode > &nodes, const vector< unsigned int > &nodeIndex, const vector< double > &vs, const vector< double > &area)
	NeuroStencil ()
	~NeuroStencil ()
void	addFlux (unsigned int meshIndex, vector< double > &f, const vector< vector< double > > &S, const vector< double > &diffConst) const
void	addLinearFlux (unsigned int index, vector< double > &f, const vector< double > &tminus, const vector< double > &t0, const vector< double > &tplus, double aminus, double aplus, double vsminus, double vs0, double vsplus, double invSq, const vector< double > &diffConst) const
void	addHalfFlux (unsigned int index, vector< double > &f, const vector< double > &t0, const vector< double > &tprime, double area, double vs0, double vsprime, double invSq, const vector< double > &diffConst) const

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Constructor & Destructor Documentation

NeuroStencil::NeuroStencil	(	const vector< NeuroNode > &	nodes,
		const vector< unsigned int > &	nodeIndex,
		const vector< double > &	vs,
		const vector< double > &	area
	)

NeuroStencil::NeuroStencil

(

)

NeuroStencil::~NeuroStencil

(

)

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Member Function Documentation

void NeuroStencil::addFlux	(	unsigned int	meshIndex,
		vector< double > &	f,
		const vector< vector< double > > &	S,
		const vector< double > &	diffConst
	)			const [virtual]

computes the Flux f in the voxel on meshIndex. Takes the matrix of molNumber[meshIndex][pool] and the vector of diffusionConst[pool] as arguments.

Implements Stencil.

Referenced by testNeuroStencil().

void NeuroStencil::addHalfFlux	(	unsigned int	index,
		vector< double > &	f,
		const vector< double > &	t0,
		const vector< double > &	tprime,
		double	area,
		double	vs0,
		double	vsprime,
		double	invSq,
		const vector< double > &	diffConst
	)			const

Referenced by testNeuroStencilFlux().

void NeuroStencil::addLinearFlux	(	unsigned int	index,
		vector< double > &	f,
		const vector< double > &	tminus,
		const vector< double > &	t0,
		const vector< double > &	tplus,
		double	aminus,
		double	aplus,
		double	vsminus,
		double	vs0,
		double	vsplus,
		double	invSq,
		const vector< double > &	diffConst
	)			const

Referenced by testNeuroStencilFlux().

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The documentation for this class was generated from the following files:

• mesh/NeuroStencil.h
• mesh/NeuroStencil.cpp