ReadCspace Class Reference

#include <ReadCspace.h>

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List of all members.

Public Member Functions
	ReadCspace ()
void	printHeader ()
void	printFooter ()
void	printMol (Id id, double conc, double concinit, double vol)
void	printReac (Id id, double kf, double kb)
void	printEnz (Id id, Id cplx, double k1, double k2, double k3)
Id	readModelString (const string &model, const string &modelname, Id pa, const string &solverClass)
void	makePlots (double plotdt)
void	build (const char *name)
void	expandEnzyme (const char *name, int e, int s, int p, int p2=0)
void	expandReaction (const char *name, int nm1)
void	deployParameters ()
void	testReadModel ()
void	makeMolecule (char name)

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Constructor & Destructor Documentation

ReadCspace::ReadCspace

(

)

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Member Function Documentation

void ReadCspace::build

(

const char *

name

)

References expandEnzyme(), expandReaction(), and makeMolecule().

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void ReadCspace::deployParameters

(

)

References Neutral::children().

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void ReadCspace::expandEnzyme	(	const char *	name,
		int	e,
		int	s,
		int	p,
		int	p2 = 0
	)

References Shell::doAddMsg(), and Shell::doCreate().

Referenced by build().

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void ReadCspace::expandReaction	(	const char *	name,
		int	nm1
	)

References Shell::doAddMsg(), and Shell::doCreate().

Referenced by build().

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void ReadCspace::makeMolecule

(

char

name

)

References Shell::doCreate().

Referenced by build().

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void ReadCspace::makePlots

(

double

plotdt

)

References Neutral::children(), Shell::doAddMsg(), Shell::doCreate(), Id::eref(), Cinfo::isA(), and Id::path().

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void ReadCspace::printEnz	(	Id	id,
		Id	cplx,
		double	k1,
		double	k2,
		double	k3
	)

void ReadCspace::printFooter

(

)

void ReadCspace::printHeader

(

)

void ReadCspace::printMol	(	Id	id,
		double	conc,
		double	concinit,
		double	vol
	)

References Element::cinfo(), ObjId::element(), Element::getName(), Cinfo::isA(), and Neutral::parent().

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void ReadCspace::printReac	(	Id	id,
		double	kf,
		double	kb
	)

Id ReadCspace::readModelString	(	const string &	model,
		const string &	modelname,
		Id	pa,
		const string &	solverClass
	)

Referenced by testReadModel().

void ReadCspace::testReadModel

(

)

References Shell::doDelete(), doubleEq(), Id::path(), and readModelString().

Referenced by testReadCspace().

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The documentation for this class was generated from the following files:

• kinetics/ReadCspace.h
• kinetics/ReadCspace.cpp