, including all inherited members.
| addChild(unsigned int child) | NeuroNode | |
| buildSpinyTree(vector< ObjId > &elist, vector< NeuroNode > &nodes, vector< Id > &shaftId, vector< Id > &headId, vector< unsigned int > &spineParent) | NeuroNode | [static] |
| buildTree(vector< NeuroNode > &nodes, vector< ObjId > elist) | NeuroNode | [static] |
| calculateLength(const CylBase &parent) | NeuroNode | |
| children() const | NeuroNode | |
| clearChildren() | NeuroNode | |
| CylBase(double x, double y, double z, double dia, double length, unsigned int numDivs) | CylBase | |
| CylBase() | CylBase | |
| elecCompt() const | NeuroNode | |
| filterSpines(vector< NeuroNode > &nodes, vector< Id > &shaftId, vector< Id > &headId, vector< unsigned int > &parent) | NeuroNode | [static] |
| findConnectedCompartments(const map< Id, unsigned int > &nodeMap, const vector< NeuroNode > &nodes) | NeuroNode | |
| findStartNode(const vector< NeuroNode > &nodes) | NeuroNode | [static] |
| getCoordinates(const CylBase &parent, unsigned int entry) const | CylBase | |
| getDia() const | CylBase | |
| getDiffusionArea(const CylBase &parent, unsigned int index) const | CylBase | |
| getIsCylinder() const | CylBase | |
| getLength() const | CylBase | |
| getMiddleArea(const CylBase &parent, unsigned int index) const | CylBase | |
| getNumDivs() const | CylBase | |
| getVoxelLength() const | CylBase | |
| getX() const | CylBase | |
| getY() const | CylBase | |
| getZ() const | CylBase | |
| innerTraverse(vector< NeuroNode > &tree, const vector< NeuroNode > &nodes, vector< unsigned int > &seen) const | NeuroNode | |
| isDummyNode() const | NeuroNode | |
| isSphere() const | NeuroNode | |
| isStartNode() const | NeuroNode | |
| matchCubeMeshEntries(const ChemCompt *other, const CylBase &parent, unsigned int startIndex, double granularity, vector< VoxelJunction > &ret, bool useCylinderCurve, bool useCylinderCap) const | CylBase | |
| nearest(double x, double y, double z, const CylBase &parent, double &linePos, double &r) const | CylBase | |
| nearest(double x, double y, double z, const CylBase &parent, unsigned int &index) const | CylBase | |
| NeuroNode(const CylBase &cb, unsigned int parent, const vector< unsigned int > &children, unsigned int startFid_, Id elecCompt, bool isSphere) | NeuroNode | |
| NeuroNode(Id elecCompt) | NeuroNode | |
| NeuroNode() | NeuroNode | |
| parent() const | NeuroNode | |
| removeDisconnectedNodes(vector< NeuroNode > &nodes) | NeuroNode | [static] |
| selectGridSize(double h, double dia1, double granularity) const | CylBase | |
| setDia(double v) | CylBase | |
| setIsCylinder(bool v) | CylBase | |
| setLength(double v) | CylBase | |
| setNumDivs(unsigned int v) | CylBase | |
| setParent(unsigned int parent) | NeuroNode | |
| setParentAndChildren(unsigned int index, int dendParent, vector< NeuroNode > &nodes, const map< Id, unsigned int > &dendMap) | NeuroNode | |
| setStartFid(unsigned int f) | NeuroNode | |
| setX(double v) | CylBase | |
| setY(double v) | CylBase | |
| setZ(double v) | CylBase | |
| startFid() const | NeuroNode | |
| traverse(vector< NeuroNode > &nodes, unsigned int start) | NeuroNode | [static] |
| volume(const CylBase &parent) const | CylBase | |
| voxelVolume(const CylBase &parent, unsigned int fid) const | CylBase | |
