, including all inherited members.
| addRow(unsigned int rowNum, const vector< int > &row) | SparseMatrix< int > | [inline] |
| addRow(unsigned int rowNum, const vector< int > &entry, const vector< unsigned int > &colIndexArg) | SparseMatrix< int > | [inline] |
| clear() | SparseMatrix< int > | [inline] |
| colIndex() const | KinSparseMatrix | |
| colIndex_ | SparseMatrix< int > | [protected] |
| computeRowRate(unsigned int row, const vector< double > &v) const | KinSparseMatrix | |
| fireReac(unsigned int reacIndex, vector< double > &S) const | KinSparseMatrix | |
| get(unsigned int row, unsigned int column) const | SparseMatrix< int > | [inline] |
| getColumn(unsigned int col, vector< int > &entry, vector< unsigned int > &rowIndex) const | SparseMatrix< int > | [inline] |
| getGillespieDependence(unsigned int row, vector< unsigned int > &cols) const | KinSparseMatrix | |
| getRow(unsigned int row, const int **entry, const unsigned int **colIndex) const | SparseMatrix< int > | [inline] |
| getRow(unsigned int row, vector< int > &e, vector< unsigned int > &c) const | SparseMatrix< int > | [inline] |
| matrixEntry() const | KinSparseMatrix | |
| N_ | SparseMatrix< int > | [protected] |
| nColumns() const | SparseMatrix< int > | [inline] |
| ncolumns_ | SparseMatrix< int > | [protected] |
| nEntries() const | SparseMatrix< int > | [inline] |
| nRows() const | SparseMatrix< int > | [inline] |
| nrows_ | SparseMatrix< int > | [protected] |
| pairFill(const vector< unsigned int > &row, const vector< unsigned int > &col, intvalue) | SparseMatrix< int > | [inline] |
| print() const | SparseMatrix< int > | [inline] |
| printInternal() const | SparseMatrix< int > | [inline] |
| printTriplet(const vector< Triplet< int > > &t) | SparseMatrix< int > | [inline] |
| reorderColumns(const vector< unsigned int > &colMap) | SparseMatrix< int > | [inline] |
| rowOperation(unsigned int row, unary_function< int, void > &f) | SparseMatrix< int > | [inline] |
| rowStart() const | KinSparseMatrix | |
| rowStart_ | SparseMatrix< int > | [protected] |
| set(unsigned int row, unsigned int column, intvalue) | SparseMatrix< int > | [inline] |
| setSize(unsigned int nrows, unsigned int ncolumns) | SparseMatrix< int > | [inline] |
| SparseMatrix() | SparseMatrix< int > | [inline] |
| SparseMatrix(unsigned int nrows, unsigned int ncolumns) | SparseMatrix< int > | [inline] |
| transpose() | SparseMatrix< int > | [inline] |
| tripletFill(const vector< unsigned int > &row, const vector< unsigned int > &col, const vector< int > &z) | SparseMatrix< int > | [inline] |
| truncateRow(unsigned int maxColumnIndex) | KinSparseMatrix | |
| unset(unsigned int row, unsigned int column) | SparseMatrix< int > | [inline] |
